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Katolog > Science > Biology > Biochemistry and Molecular Biology > Gene Expression


Includes sites related to processes of the Central Dogma of Genetics: transcriotion to mRNA, mRNA splicing, translation to polypeptides, modification of the resulting polypeptides by specific proteolysis and conjugation to carbohydrates, lipids and prosthetic groups. Also includes control of the processes: pre-transcriptional by factors controlling transcription to mRNA and post-transcriptional control by RNA interference (iRNA). A separate sub-category includes sites related to viral reverse transcription.
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Links:

Regulation of Gene Expression
http://web.wi.mit.edu/young/pub/regulation.html

Regulation of Gene Expression

Overview of different aspects of gene expression, including transcription, chromatin modification, and analysis of whole genomes, from Massachusetts Institute of Technology, Cambridge, Mass, USA.
web.wi.mit.edu/young/pub/regulation.html
Eukaryotic Gene Expression Problem Set
http://www.biology.arizona.edu/molecular_bio/problem_sets/mol_genetics_of_eukaryotes/eukaryotes.html

Eukaryotic Gene Expression Problem Set

Multiple choice questions about post-transcriptional modification of RNA, promoters, and nuclear RNA processing.
www.biology.arizona.edu/../../../eukaryotes.html
Ribosomes
http://users.rcn.com/jkimball.ma.ultranet/BiologyPages/R/Ribosomes.html

Ribosomes

Explanation of how the information encoded in mRNA is translated into a polypeptide. Includes differences between prokaryotes and eukaryotes by John W. Kimball, now retired from Harvard College.
users.rcn.com/../BiologyPages/R/Ribosomes.html
Role of the Ribosome
http://cellbio.utmb.edu/cellbio/ribosome.htm

Role of the Ribosome

Illustrated explanation of the ribosomal protein synthesis by Gwen V. Childs, University of Texas, Galveston, TX.
cellbio.utmb.edu/cellbio/ribosome.htm
Molecular Genetics Webtext
http://opbs.okstate.edu/~melcher/MG/FMG01.html

Molecular Genetics Webtext

An online textbook on chromosomes, principles of genetic engineering, basic molecular genetics and experimental methods.
opbs.okstate.edu/~melcher/MG/FMG01.html
Genomes to Life
http://doegenomestolife.org/

Genomes to Life

The US Department of Energy at Oak Ridge program for research in moleular biology: goals and results.
doegenomestolife.org
Induction of Repair Genes in Yeast
http://www.curie.u-psud.fr/Equipe_Dutreix/web/article1/tab-art1.html

Induction of Repair Genes in Yeast

Mercier G., Denis Y., Marc P., Picard L. and Dutreix M.: Transcriptional induction of repair genes during slowing of replication in irradiated Saccharomyces cerevisiae. Mutation Research 487 (dec 2001)157-172: article and supporting background data.
www.curie.u-psud.fr/Equipe_Dutreix/web/article1/tab-art1.html
Mammary Genome Anatomy Project
http://mammary.nih.gov/

Mammary Genome Anatomy Project

Forum to integrate various aspects of mammary gland biology, including cellular and developmental aspects, and to promote collaborations and the exchange of ideas, knowledge and resources at NIH, Maryland.
mammary.nih.gov
Biochemistry of Nucleic Acids
http://oregonstate.edu/instruction/bb492/general/schedule.html

Biochemistry of Nucleic Acids

Lecture notes on nucleic acid structure, DNA replication and repair, the genetic code and translation, as well as cancer genes.
oregonstate.edu/instruction/bb492/general/schedule.html
RNA Zone
http://www.rnazone.com/

RNA Zone

Extensive catalog of links in genomics and proteomics.
www.rnazone.com
Alternative Splicing
http://www.exonhit.com/alternativesplicing/

Alternative Splicing

Resource for intervention in the key steps in post-translocation regulatory process, with analysis tools and implications in pathologies. Maintained by Exonhit Therapeutics SA, Paris, France.
www.exonhit.com/alternativesplicing
Gene Expression: Transcription
http://users.rcn.com/jkimball.ma.ultranet/BiologyPages/T/Transcription.html

Gene Expression: Transcription

Resource for transcription events during gene formation including schematic diagrams.
users.rcn.com/../BiologyPages/T/Transcription.html
Genome-Wide Expression
http://web.wi.mit.edu/young/expression/home.html

Genome-Wide Expression

Report on a project to analyze the transcriptional regulatory circuitry of the yeast cell. From the Young Lab at the Whitehead Institute for Biomedical Research.
web.wi.mit.edu/young/expression/home.html
Prokaryotic Genetics and Gene Expression
http://web.mit.edu/esgbio/www/pge/pgedir.html

Prokaryotic Genetics and Gene Expression

Chapter from the Massachusetts Institute of Technology (USA) introductory hypertextbook on molecular biology.
web.mit.edu/esgbio/www/pge/pgedir.html
Anatomy of a Comparative Gene Expression Study
http://www.cs.wustl.edu/~jbuhler/research/array/

Anatomy of a Comparative Gene Expression Study

Clear explanation of the process of comparing the gene expression in two cell populations or tissue samples by fluorescent microarray technique.
www.cs.wustl.edu/~jbuhler/research/array
Control of Gene Expression
http://www.accessexcellence.org/RC/VL/GG/control_Express.html

Control of Gene Expression

A collection of diagrams illustrating the fundamentals of molecular biology.
www.accessexcellence.org/RC/VL/GG/control_Express.html
Serial Analysis of Gene Expression
http://www.sagenet.org/

Serial Analysis of Gene Expression

Explanation of Serial Analysis of Gene Expression (SAGE), a method for analysis of gene expression patterns.
www.sagenet.org
Gene Expression
http://en.wikipedia.org/wiki/Gene_expression

Gene Expression

Article in Wikipedia.
en.wikipedia.org/wiki/Gene_expression
3'UTR
http://en.wikipedia.org/wiki/3%27_UTR

3'UTR

Wikipedia article on the untranslated regions at the ends of mRNA.
en.wikipedia.org/wiki/3%27_UTR
Alternative Splicing
http://en.wikipedia.org/wiki/Alternative_splicing

Alternative Splicing

Wikipedia article on the process in eukaryotes in which the splicing process of a pre-mRNA can lead to different ripe mRNA molecules and therefore to different proteins.
en.wikipedia.org/wiki/Alternative_splicing
Enhancer
http://en.wikipedia.org/wiki/Enhancer

Enhancer

Wikipedia article on enhancers, short pieces of DNA which bind to trans-acting factors to enhance transcription levels of genes.
en.wikipedia.org/wiki/Enhancer
Epigenetics
http://en.wikipedia.org/wiki/Epigenetics

Epigenetics

Wikipedia article on processes that lead to inheritance that is not reflected in the sequences of the nuclear DNA.
en.wikipedia.org/wiki/Epigenetics
Exon
http://en.wikipedia.org/wiki/Exon

Exon

Wikipedia article on regions in genes that are expressed in mature mRNA and in proteins.
en.wikipedia.org/wiki/Exon
Intron
http://en.wikipedia.org/wiki/Intron

Intron

Wikipedia article on sections of genes that are eliminated by splicing in the formation of mature mRNA and therefore not expressed as proteins.
en.wikipedia.org/wiki/Intron
Expressed Sequence Tag
http://en.wikipedia.org/wiki/Expressed_sequence_tag

Expressed Sequence Tag

Wikipedia article: EST are short sub-sequences of genes, used in mRNA sequencing and in construction of DNA microarrays.
en.wikipedia.org/wiki/Expressed_sequence_tag

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