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Katolog > Science > Biology > Evolution > Software


Software that can be used to predict and describe evolution
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    Links:

    The Museum of Evolution and Artificial Life (MEAL)
http://home.pacbell.net/s-max/scott/meal.html

    The Museum of Evolution and Artificial Life (MEAL)

    MEAL demonstrates concepts in evolutionary biology to impatient visitors with modest hardware.
    home.pacbell.net/s-max/scott/meal.html
    Phylogeny and Evolution
http://evolve.zoo.ox.ac.uk/

    Phylogeny and Evolution

    This is a site for various projects in evolution, molecular evolution and phylogenetic epidemiology being carried out by members in the Department of Zoology at the University of Oxford.
    evolve.zoo.ox.ac.uk
    Altruist
http://www.agner.org/evolution/

    Altruist

    Free PC software package for simulating evolution in structured populations. Includes models for group selection, group territoriality, Wright's shifting balance model of punctuated equilibria and speciation.
    www.agner.org/evolution
    AJ's Black Smoker
http://www.well.com/~ajmilne/black_smoker/

    AJ's Black Smoker

    A java-based simulation illustrating natural selection in action, with a dynamic environment affected by simulated biological activity. Requires Java 2 plug-in. Contextual help, explanatory material available.
    www.well.com/~ajmilne/black_smoker
    Food Chain
http://www.pbm.com/~lindahl/fchain.html

    Food Chain

    Open-ended simulation game of evolving species. Players design species of animals, which compete against each other in a virtual jungle.
    www.pbm.com/~lindahl/fchain.html
    evolution@home
http://www.evolutionary-research.net

    evolution@home

    Designed on the model of SETI@home, this project makes evolutionary data available for download to, and analysis on, personal computers. Splitting up the work among a variety of machines results in faster results generation.
    www.evolutionary-research.net
    Gene Pool
http://www.ventrella.com/GenePool/gene_pool.html

    Gene Pool

    In this artificial life simulation colourful creatures evolve the ability to swim in an aquatic environment.
    www.ventrella.com/GenePool/gene_pool.html
    DarwinBots
http://digilander.libero.it/darwinbots/

    DarwinBots

    DarwinBots is an artificial life software in some ways similar to C-Robots and other programming games. Every simulated creature is a virtual robot with complex input and outputs and each DNA is in fact a program that acts on a memory cells array. Freewar
    digilander.libero.it/darwinbots
    GALife
http://digilander.libero.it/galife/

    GALife

    Watch creatures based on a neural network learn to solve simple problems (eating the right foods, escaping traps) through random mutations and selection of the fittest. Highly configurable, with a modular structure.
    digilander.libero.it/galife
    Evolutionary Systems and Artificial Life
http://informatics.indiana.edu/rocha/alife.html

    Evolutionary Systems and Artificial Life

    This course presents an overview of the field of Evolutionary Systems and its applied branch of Artificial Life. The historical and philosophical foundations of evolutionary thought are explored with particular emphasis on computational simulations of its
    informatics.indiana.edu/rocha/alife.html
    Amber ALife Wasps
http://www.geocities.com/CapeCanaveral/2971/awasps.html

    Amber ALife Wasps

    Simulation of evolution by natural selection in a wasp population.
    www.geocities.com/CapeCanaveral/2971/awasps.html
    Darwin at Home
http://darwinathome.com/

    Darwin at Home

    Planetwide effort to create networked digital ecosystems. Information on participating teams, how to get involved, and news.
    darwinathome.com

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  • bioinformatics
  • genetic programming
  • genetics
  • phylogenetic analysis