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Katolog > Science > Physics > Crystallography > Software

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      Links:

      SnB
http://www.hwi.buffalo.edu/SnB/

      SnB

      A computer program based on Shake-and-Bake, a dual-space direct-methods procedure for determining crystal structures from X-ray diffraction data.
      www.hwi.buffalo.edu/SnB
      Crystal Studio
http://www.crystalsoftcorp.com/CrystalStudio/

      Crystal Studio

      Display and manipulation of crystal structures and simulation of diffraction patterns. Windows 95/98/NT platform.
      www.crystalsoftcorp.com/CrystalStudio
      HKL
http://www.hkl-xray.com/

      HKL

      The triad of Denzo, XDisplayF and Scalepack: programs to visualize and interpret X-ray diffraction images.
      www.hkl-xray.com
      LaboTex - The Texture Analysis Software for Windows (95/98/NT)
http://www.labosoft.com.pl/ver20.htm

      LaboTex - The Texture Analysis Software for Windows (95/98/NT)

      Qualitative and quantitative analysis of crystallographic textures. ODF calculation using both types of experimental data : pole figures (X-Ray,neutrons) or sets of individual orientations (EBSD,model calculations).
      www.labosoft.com.pl/ver20.htm
      SPEC / Certified Scientific Software
http://www.certif.com/

      SPEC / Certified Scientific Software

      a UNIX-based software package for instrument control and data acquisition used for X-ray diffraction at synchrotrons and in university, national and industrial laboratories.
      www.certif.com
      Amira
http://www.amiravis.com/

      Amira

      An advanced 3D visualization and modeling system, especially useful for displaying 3D image data and simulation results. Powerful segmentation tools and automatic geometry reconstruction help to generate surface models (e.g. VRML) from 3D image data.
      www.amiravis.com
      GRASP
http://trantor.bioc.columbia.edu/grasp/

      GRASP

      Display molecules and molecular surfaces, optionally representing a field (for example electrostatic) as local colors. Silicon Graphics (IRIX) platform.
      trantor.bioc.columbia.edu/grasp
      CCP4
http://www.dl.ac.uk/CCP/CCP4/main.html

      CCP4

      Comprehensive computing suite for protein crystallography. VMS and Unix platforms.
      www.dl.ac.uk/CCP/CCP4/main.html
      O
http://imsb.au.dk/~mok/o/

      O

      Directory of information for users of the "O" crystallographic package to model, display and build macromolecules. Silicon Graphics (IRIX) and Linux platform.
      imsb.au.dk/~mok/o
      PROCHECK
http://www.biochem.ucl.ac.uk/~roman/procheck/procheck.html

      PROCHECK

      Protein structure validation program. Unix platform.
      www.biochem.ucl.ac.uk/~roman/procheck/procheck.html
      SINCRIS
http://www.lmcp.jussieu.fr/sincris/logiciel/#liste

      SINCRIS

      Database of software for crystallography.
      www.lmcp.jussieu.fr/sincris/logiciel/#liste
      Uppsala Software Factory
http://alpha2.bmc.uu.se/~gerard/manuals/

      Uppsala Software Factory

      Software for macromolecular crystallography and structural biology. Many of these programs collaborate with "O" (see there).
      alpha2.bmc.uu.se/~gerard/manuals
      Jana2000
http://www-xray.fzu.cz/jana/jana.html

      Jana2000

      System for solving and refinement of regular, modulated and composite structures from monocrystal and powder diffraction data.
      www-xray.fzu.cz/jana/jana.html
      Diamond - Visual Crystal Structure Information System
http://www.crystalimpact.com/diamond

      Diamond - Visual Crystal Structure Information System

      an MS Windows application for the exploration and drawing of crystal structures.
      www.crystalimpact.com/diamond
      PLATON
http://www.cryst.chem.uu.nl/platon/

      PLATON

      A versatile crystallographic program implementing a large variety of standard geometrical calculations, tests, utilities, graphics and several filters. Unix and Windows platforms.
      www.cryst.chem.uu.nl/platon
      CrystalDesigner
http://www.crystaldesigner.no/

      CrystalDesigner

      Tool for building, studying and visualizing all kinds of crystal structures. MacOS platform.
      www.crystaldesigner.no
      CrystalMaker Software
http://www.crystalmaker.co.uk/

      CrystalMaker Software

      Real-time photo-realistic crystal structures program for Macintosh. Download a demo version - plus our free diffraction software and QuickTime VR movies.
      www.crystalmaker.co.uk
      Crystals
http://www.xtl.ox.ac.uk/crystals.html

      Crystals

      The software package for single crystal X-ray structure refinement and analysis consists of CRYSTALS, Cameron and specially recompiled versions of SIR92 and SHELXS.
      www.xtl.ox.ac.uk/crystals.html
      AutoDock
http://www.scripps.edu/pub/olson-web/doc/autodock/

      AutoDock

      AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure.
      www.scripps.edu/pub/olson-web/doc/autodock
      CCP14 Homepage - Single Crystal and Powder Diffraction
http://www.ccp14.ac.uk/

      CCP14 Homepage - Single Crystal and Powder Diffraction

      Freely available crystallographic software for Academia
      www.ccp14.ac.uk
      CaRIne Crystallography
http://pro.wanadoo.fr/carine.crystallography/

      CaRIne Crystallography

      CaRIne is used for teaching crystallography and for research in materials science, chemistry and earth sciences. It brings real lattices, X-Ray diffraction diagrams, reciprocal lattices and stereographic projections all at the same time in a multi-windowe
      pro.wanadoo.fr/carine.crystallography
      The Richardsons' 3D Protein Structure Laboratory and Kinemage Homepage
http://kinemage.biochem.duke.edu

      The Richardsons' 3D Protein Structure Laboratory and Kinemage Homepage

      Software and methods source for molecular model visualization (Mage, JavaMage, Prekin); model validation via all-atom contact analysis (Probe, Reduce, MolProbity) and utility (Kincontour, Dang, Cluster, Bndlst, Atvol). Amino acid rotamers database for m
      kinemage.biochem.duke.edu
      ESPOIR
http://www.cristal.org/sdpd/espoir/

      ESPOIR

      Open source software for solving crystal structures from powder diffraction data (or single crystal data) by Monte Carlo methods.
      www.cristal.org/sdpd/espoir
      KPLOT
http://www.crystalimpact.de/kplot.htm

      KPLOT

      Multi-purpose tool for crystal structure visualization and analysis, free download, available for Windows and Linux
      www.crystalimpact.de/kplot.htm
      UMWEG and PSILAM
http://www.rrz.uni-hamburg.de/mpi/rossmanith/frame.html

      UMWEG and PSILAM

      Programs for calculation and graphical representation of multiple diffraction patterns.
      www.rrz.uni-hamburg.de/mpi/rossmanith/frame.html

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